Transcriptome data of the endophytic fungus (CHS3)

Published: 20 March 2023| Version 1 | DOI: 10.17632/x25zzdptrh.1
Contributors:
yuanzhen Liu, Yupeng Cheng, Guangjie Liu, Ning Gao

Description

We co-cultured endophytic fungus (CHS3) with the Bupleurum scorzonerifolium Willd. suspension cells (BSS cells). Then the Illumina HiSeq 2500 was performed to detect the transcriptome of the CHS3 before and after co-culture. Trinity was used with min_kmer_cov set to 2 by default and all other parameters set to defaults to mix and concatenate the valid data of the samples. Poly-N and low-quality reads were removed to get clean data Unigene.

Files

Institutions

Heilongjiang University of Chinese Medicine

Categories

Fungus, Chinese Herbs

Licence