Chioso labeling of MOSTA dataset

Published: 4 June 2024| Version 1 | DOI: 10.17632/x99c2gfcwg.1
Contributor:
Ji Yu

Description

Cell type labeling of MOSTA spatial transcriptomics dataset (https://db.cngb.org/stomics/mosta/) using TOME scRNAseq data (http://tome.gs.washington.edu/) as the reference. Pixel-level labeling were obtained using chioso (https://github.com/jiyuuchc/chioso). Two sets of cell-level labeling were computed using TACCO (https://github.com/simonwm/tacco) and RCTD (https://github.com/JZL/RCTD).

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Institutions

UConn Health

Categories

Adversarial Machine Learning, Spatial Transcriptomics

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