pMHCs

Published: 24 June 2024| Version 1 | DOI: 10.17632/yvbwg5sjg2.1
Contributor:
Etiele de Senna Silveira

Description

Our hypotesis is based in compared the surfaces of pMHCs made with immunogenic epitopes and self peptides to find similaryties between them. The images from pMHCs files was processed with Python scripts to get the median and the variation of RGB channels of the regions of interests.

Files

Steps to reproduce

In separated folders was the images made with the pdb of the complexes. The complexes was modeled with DockTope. The eletrostatic potential was calculated with Delphi. The surfaces was made in GRASP2 with range +3,-3. The images was saved and deposited here.

Institutions

Universidade Federal do Rio Grande do Sul Instituto de Biociencias

Categories

Physical Property of Proteins, Structural Property of Proteins

Funding

Coordenação de Aperfeicoamento de Pessoal de Nível Superior

Licence