Genetic diversity of Echinococcus multilocularis from red foxes and humans in northern and northeastern Poland investigated using the microsatellite EmsB

Description

Raw FSA files (fsa_files), normalised EmsB profiles of Echinococcus multilocularis metacestodes from humans and adult tapeworms from red foxes hunted in selected districts of Pomorskie, Warmińsko-Mazurskie, and Podlaskie Voivodships (profiles.txt), and an R script generating a UPGMA phenogram cut with genetic distance thresholds and/or Dynamic Tree Cut (hierarchical_clustering.R).

Steps to reproduce

Follow the instructions in: Knapp J, Damy S, Brillaud J, et al. EWET: Data collection and interface for the genetic analysis of Echinococcus multilocularis based on EmsB microsatellite. PLoS One. 2017; 12(10): e0183849. Published 2017 Oct 3. doi:10.1371/journal.pone.0183849.

Institutions

• Gdanski Uniwersytet Medyczny

Categories

Funders

• National Science Center

  Poland

  Grant ID: 2020/37/B/NZ7/03934

Licence