Molecular Phylogenetics and Evolution

Dataset associated with Rose et al. (2018): "Phylogeny, historical biogeography, and diversification of angiosperm order Ericales suggest ancient Neotropical and East Asian connections" published in Molecular Phylogenetics and Evolution. Datasets include input files for phylogenetic analyses, biogeographical analysis in BioGeoBEARS, and diversification analyses in BAMM not included in the supplemental information directly associated with the article.

The vcf file of the SNP calls and the abc scripts for EST-SSR data used in this study

Dataset used to reconstruct the phylogenetic relationships among Aciculata (Annelida). The datasets comprise transcriptomic matrices, species trees (ASTRAL and concatenated supermatrix) and gene trees used for data exploration.

Trees, DNA alignments and phylogenetic analytics. Alignments, trees inferred from alignments and analytics describing the support of those trees, and the quality of the alignments.

UCE data at 50% taxon coverage

Files for the different analyses described in Methods

Supplementary data for Uit de Weerd, D. R., & Gittenberger, E. (2013). Phylogeny of the land snail family Clausiliidae (Gastropoda: Pulmonata). Molecular Phylogenetics and Evolution 67 (1): 201–216 [these data are inaccessible or missing from the 'supplementary data' accompanying the publication on the journal's website (https://doi.org/10.1016/j.ympev.2013.01.011)]

These sequence data and alignments were used to reconstruct the phylogeny for the subfamily Rhynchocyoninae (Family Macroscelididae, Order Macroscelidea). They were generated by Elizabeth Carlen in the Center for Comparative Genomics at the California Academy of Sciences and the laboratories at the University of Alaska Fairbanks.

Concatenated alignment of 18S, 28S, COI from 191 cyclopoid specimens

Raw data sets, including mitochondrial sequences, nuclear sequences, microsatellite data and GBS data used in this study.